SNP | Gene | Genome position | Minor allele | Minor allele frequency (%) | P value | OR (95% range) |
SNPs significantly correlating with CFT response after 3months | ||||||
rs55667289 | FLT4 | chr5:180 621 641 | G | 0.4 | 0.0005 | 0.746 (0.63 to 0.88) |
rs7691507* | KDR | chr4:55 076 834 | C | 20.7 | 0.0051 | 1.056 (1.02 to 1.10) |
rs5758223 | MIR1281 | chr22:41 093 916 | G | 26.0 | 0.0115 | 0.954 (0.92 to 0.99) |
rs9513070 | FLT1 | chr13:28 305 702 | G | 38.2 | 0.0204 | 1.045 (1.01 to 1.09) |
rs4820431 | EP300 | chr22:41 153 917 | A | 35.8 | 0.0232 | 0.958 (0.92 to 0.99) |
rs3025035 | VEGFA | chr6:43 783 622 | T | 6.3 | 0.0428 | 0.945 (0.90 to 1.00) |
rs2305945 | KDR | chr4:55 105 679 | T | 32.9 | 0.0472 | 0.963 (0.93 to 1.00) |
SNPs significantly correlating with CFT response after 12months | ||||||
rs3775194 | VEGFC | chr4:176 702 723 | G | 39.2 | 0.0006 | 1.089 (1.04 to 1.14) |
rs12054587 | VEGFC | chr4:176 757 527 | A | 9.7 | 0.0048 | 1.106 (1.03 to 1.19) |
rs2046462 | VEGFC | chr4:176 681 324 | C | 29.6 | 0.0064 | 1.067 (1.02 to 1.12) |
rs17086609 | FLT1 | chr13:28 355 574 | G | 33.3 | 0.0076 | 1.067 (1.02 to 1.12) |
rs9551462 | FLT1 | chr13:28 378 967 | T | 35.0 | 0.0207 | 1.057 (1.01 to 1.11) |
rs20551 | EP300 | chr22:41 152 004 | G | 28.0 | 0.0222 | 1.056 (1.01 to 1.11) |
rs7691507* | KDR | chr4:55 076 834 | C | 20.7 | 0.0256 | 1.058 (1.01 to 1.11) |
rs2820037 | / | chr1:239 273 242 | T | 11.8 | 0.0267 | 0.934 (0.88 to 0.99) |
rs10020464 | KDR | chr4:55 112 903 | T | 32.0 | 0.0379 | 0.952 (0.91 to 1.00) |
rs12510099 | VEGFC | chr4:176 681 802 | A | 10.5 | 0.0451 | 1.064 (1.00 to 1.13) |
CFT, central foveal thickness; SNP, single nucleotide polymorphism.